Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015876584.1_cds_XP_016436150.1_32039
CDS Infomation

[gene=LOC107762319] [db_xref=GeneID:107762319] [protein=splicing factor U2AF-associated protein 2-like] [protein_id=XP_016436150.1] [location=join(23416..23467,25317..25418,25727..25861,25960..26150,26418..26639,26873..26965,27089..27127,27781..27870,27972..28074,28230..28310,30127..30203,30586..30666,31810..31901,32354..32480)] [gbkey=CDS]
Sequence

ATGGCATCAATTGATGCCTCTGAAAATCATCCTTCTCAACAGTATAACATTGGTGAAGGC
AACAGTAGTTTATATACGACTTCTGGATTGGGTTGGTATGTGCTTGCACAAGACCAACAG
CAGTTAGGCCCATATACGATACCTGAATTGCGTGAGCACTACTCTGCTGGATACCTACTG
GAGAATACACTTGTATGGTCAGAAGGAAGGAGTGATTGGCAACCACTTTGCTCGATTCCT
GGATTGCTAACTGATGTACCTGAGCAGAGCATTGATGGTACAAATTCAGTTCCTTTGACC
TCTAATGATCCATTGGATGAGTATGAAAAGTTTCAAAAGGAAGTGAAAGAGGCGGAGGAT
GAGCAAGCAGTTGATGAGGAACAAAGACCTTCAACTCCTCCAGATGGTGAAGAGGAGTTC
ACTGATGATGATGGAACTAGGTACAAGTGGGATAAAGCTCTTAAAGTTTGGGTACCTCAG
GAAGATCCAACCGAGAAAAATGAGTATGGTCTAGAAGATATGACTTACGCTGAAGAAGAG
GAACTTTTTCCAACTTTGCCCGCTGACGATTCTTCTGGAAATGAGAACAAGAACATGGAT
AACATTGAAGCTGATAAGACTGCTAGAGATTCAGCTGAAACCACAGCGGCGACAGAAAAT
GGCAAGAGAAAACTGCCTGAAACAGATGATTCTGAAAAGAAGGAAGCGAATAAACCTCCA
GATAGCTGGTTCGAATTAAAAGTCAATACTCATGTCTATATTACAGGATTGCCAGAAGAT
GTCACTGTTGACGAGGTGGTTGAAGTCTTTTCAAAGTGCGGGATCATAAAGGAGGATCCA
GAAACACAAAAGCCTCGAGTGAAGATTTATTTTGACAAAGAAACTGGAAGGAAGAAGGGC
GATGCACTTGTTACATACCTTAAGGAACCTTCAGTTGATCTAGCCATTAAAATTTTGGAT
GGCGCACCTTTACGCCCAGGTGACAAAATCCCTATGACAGTTACACAAGCAAAGTTTGAG
CAAAAAGGGGAAAGGTTCATACCCAAGAATGTGGACAAGAAGAAGAAGAAGAAACTCCAA
AAAGTTGAGCATAAGATGCTTGGCTGGGGTGGTCGGGATGACGCAAAGATATTGGTCCCA
GCTACTGTTTTGCTTCGCTACATGTTCACACCAGCTGAATTGCGGGAGGATGAGAATTTA
TGCTCCGAACTACAGCAGGACGTCCAAGAAGAGTGTTCAAAGTTTGGCCCAGTGGACTTA
GTAAAGGTGTGCGAAAATCATCCACAAGGGGTTGTTTTGGTCAAATTTAAGGATAGGAGG
GATGCACATAGGTGCACTGAGGCGATGAATGGACGCTGGTTTGCTGGTCGGCAAATCCAT
GCTAGTGAGGATGATGGATCTGTTAACCATGCTTTAGTCCGAGATATAGATGAAGAAACT
GATAGATTAGAGAAGTTTGGAGCTGAACTCGAAGCTGATTCATAG

Peptide Sequence

PEP ID

XP_016436150.1
PEP Infomation

PREDICTED: splicing factor U2AF-associated protein 2-like [Nicotiana tabacum]
Sequence

MASIDASENHPSQQYNIGEGNSSLYTTSGLGWYVLAQDQQQLGPYTIPELREHYSAGYLL
ENTLVWSEGRSDWQPLCSIPGLLTDVPEQSIDGTNSVPLTSNDPLDEYEKFQKEVKEAED
EQAVDEEQRPSTPPDGEEEFTDDDGTRYKWDKALKVWVPQEDPTEKNEYGLEDMTYAEEE
ELFPTLPADDSSGNENKNMDNIEADKTARDSAETTAATENGKRKLPETDDSEKKEANKPP
DSWFELKVNTHVYITGLPEDVTVDEVVEVFSKCGIIKEDPETQKPRVKIYFDKETGRKKG
DALVTYLKEPSVDLAIKILDGAPLRPGDKIPMTVTQAKFEQKGERFIPKNVDKKKKKKLQ
KVEHKMLGWGGRDDAKILVPATVLLRYMFTPAELREDENLCSELQQDVQEECSKFGPVDL
VKVCENHPQGVVLVKFKDRRDAHRCTEAMNGRWFAGRQIHASEDDGSVNHALVRDIDEET
DRLEKFGAELEADS

Transcript Sequence

Gene sequence data has not been registered.